Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cacna1hO88427 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.05■□□□□ -0
Cacna1hO88427 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1hO88427 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cacna1hO88427 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.05■□□□□ -0
Cacna1hO88427 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.05■□□□□ -0
Cacna1hO88427 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cacna1hO88427 Gm6257-201ENSMUST00000163864 910 ntBASIC15.05■□□□□ -0
Cacna1hO88427 Gm3786-201ENSMUST00000202659 378 ntBASIC15.05■□□□□ -0
Cacna1hO88427 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.05■□□□□ -0
Cacna1hO88427 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1hO88427 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cacna1hO88427 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cacna1hO88427 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1hO88427 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cacna1hO88427 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cacna1hO88427 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.04■□□□□ -0
Cacna1hO88427 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.04■□□□□ -0
Cacna1hO88427 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.04■□□□□ -0
Cacna1hO88427 CT009713.10-202ENSMUST00000225734 696 ntBASIC15.04■□□□□ -0
Cacna1hO88427 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.04■□□□□ -0
Cacna1hO88427 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cacna1hO88427 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.04■□□□□ -0
Cacna1hO88427 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.04■□□□□ -0
Cacna1hO88427 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Cacna1hO88427 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Gm9002-201ENSMUST00000178437 499 ntBASIC15.04■□□□□ -0
Cacna1hO88427 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cacna1hO88427 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Cacna1hO88427 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.04■□□□□ -0
Cacna1hO88427 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cacna1hO88427 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.03■□□□□ -0
Cacna1hO88427 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cacna1hO88427 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.03■□□□□ -0
Cacna1hO88427 Gm12091-201ENSMUST00000146791 830 ntBASIC15.03■□□□□ -0
Cacna1hO88427 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.03■□□□□ -0
Cacna1hO88427 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.03■□□□□ -0
Cacna1hO88427 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.03■□□□□ -0
Cacna1hO88427 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cacna1hO88427 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Cacna1hO88427 Gm15806-201ENSMUST00000120696 955 ntBASIC15.03■□□□□ -0
Cacna1hO88427 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.03■□□□□ -0
Cacna1hO88427 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Cacna1hO88427 Gm42693-201ENSMUST00000196779 631 ntBASIC15.03■□□□□ -0
Cacna1hO88427 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.03■□□□□ -0
Cacna1hO88427 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cacna1hO88427 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1hO88427 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1hO88427 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1hO88427 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1hO88427 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1hO88427 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.02■□□□□ -0
Cacna1hO88427 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Cacna1hO88427 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1hO88427 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cacna1hO88427 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1hO88427 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC15.02□□□□□ -0.01
Cacna1hO88427 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.02□□□□□ -0.01
Cacna1hO88427 Gm10478-201ENSMUST00000084451 396 ntBASIC15.02□□□□□ -0.01
Cacna1hO88427 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacna1hO88427 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1hO88427 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms