Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tgfbr3O88393 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.74□□□□□ -0.05
Tgfbr3O88393 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.74□□□□□ -0.05
Tgfbr3O88393 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gm13216-201ENSMUST00000117145 591 ntBASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gm9385-201ENSMUST00000117563 472 ntBASIC14.74□□□□□ -0.05
Tgfbr3O88393 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Rpph1-201ENSMUST00000175096 319 ntBASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gm25948-201ENSMUST00000175334 112 ntBASIC14.74□□□□□ -0.05
Tgfbr3O88393 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gm20949-201ENSMUST00000206478 952 ntBASIC14.74□□□□□ -0.05
Tgfbr3O88393 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tgfbr3O88393 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Gm12008-201ENSMUST00000117791 755 ntBASIC14.73□□□□□ -0.05
Tgfbr3O88393 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Tgfbr3O88393 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Gm27321-201ENSMUST00000185021 205 ntBASIC14.73□□□□□ -0.05
Tgfbr3O88393 Gm43125-201ENSMUST00000201724 730 ntBASIC14.73□□□□□ -0.05
Tgfbr3O88393 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.73□□□□□ -0.05
Tgfbr3O88393 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tgfbr3O88393 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Tgfbr3O88393 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Tgfbr3O88393 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.71□□□□□ -0.05
Tgfbr3O88393 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms