Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim1O70400 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim1O70400 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.35■□□□□ 0.05
Pdlim1O70400 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pdlim1O70400 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.35■□□□□ 0.05
Pdlim1O70400 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.35■□□□□ 0.05
Pdlim1O70400 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Pdlim1O70400 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pdlim1O70400 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.35■□□□□ 0.05
Pdlim1O70400 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pdlim1O70400 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim1O70400 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim1O70400 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Gm15173-201ENSMUST00000122049 433 ntBASIC15.34■□□□□ 0.05
Pdlim1O70400 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.34■□□□□ 0.05
Pdlim1O70400 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 AV026068-213ENSMUST00000223675 1171 ntBASIC15.34■□□□□ 0.05
Pdlim1O70400 Mzt1-203ENSMUST00000227948 952 ntBASIC15.34■□□□□ 0.05
Pdlim1O70400 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pdlim1O70400 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.34■□□□□ 0.05
Pdlim1O70400 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.34■□□□□ 0.05
Pdlim1O70400 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pdlim1O70400 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pdlim1O70400 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Prob1-201ENSMUST00000097619 3021 ntBASIC15.33■□□□□ 0.05
Pdlim1O70400 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.33■□□□□ 0.05
Pdlim1O70400 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pdlim1O70400 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.33■□□□□ 0.04
Pdlim1O70400 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Pdlim1O70400 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Gm18489-201ENSMUST00000172565 551 ntBASIC15.33■□□□□ 0.04
Pdlim1O70400 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.33■□□□□ 0.04
Pdlim1O70400 Gm37153-201ENSMUST00000193637 231 ntBASIC15.33■□□□□ 0.04
Pdlim1O70400 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.33■□□□□ 0.04
Pdlim1O70400 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pdlim1O70400 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.32■□□□□ 0.04
Pdlim1O70400 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pdlim1O70400 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.32■□□□□ 0.04
Pdlim1O70400 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pdlim1O70400 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.32■□□□□ 0.04
Pdlim1O70400 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.32■□□□□ 0.04
Pdlim1O70400 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Pdlim1O70400 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.32■□□□□ 0.04
Pdlim1O70400 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.32■□□□□ 0.04
Pdlim1O70400 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms