Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.07■□□□□ 0.32
Trdmt1O55055 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Trdmt1O55055 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trdmt1O55055 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.07■□□□□ 0.32
Trdmt1O55055 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Trdmt1O55055 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.07■□□□□ 0.32
Trdmt1O55055 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trdmt1O55055 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trdmt1O55055 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trdmt1O55055 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trdmt1O55055 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.06■□□□□ 0.32
Trdmt1O55055 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trdmt1O55055 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Gm22175-201ENSMUST00000175007 78 ntBASIC17.06■□□□□ 0.32
Trdmt1O55055 Mir7023-201ENSMUST00000185093 64 ntBASIC17.06■□□□□ 0.32
Trdmt1O55055 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.06■□□□□ 0.32
Trdmt1O55055 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.06■□□□□ 0.32
Trdmt1O55055 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trdmt1O55055 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Trdmt1O55055 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trdmt1O55055 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.05■□□□□ 0.32
Trdmt1O55055 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trdmt1O55055 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm22065-201ENSMUST00000103753 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm22066-201ENSMUST00000103761 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24932-201ENSMUST00000103763 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24115-201ENSMUST00000103799 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm22190-201ENSMUST00000103827 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm22191-201ENSMUST00000103831 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24721-201ENSMUST00000103849 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm28018-201ENSMUST00000103869 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm26399-201ENSMUST00000103937 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.05■□□□□ 0.32
Trdmt1O55055 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm25349-201ENSMUST00000177728 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm23616-201ENSMUST00000177797 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm25871-201ENSMUST00000177816 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24752-201ENSMUST00000178240 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24496-201ENSMUST00000178287 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm25649-201ENSMUST00000178476 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm25548-201ENSMUST00000178681 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm23147-201ENSMUST00000178841 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm26095-201ENSMUST00000179270 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm22171-201ENSMUST00000179283 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm23936-201ENSMUST00000179354 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm22619-201ENSMUST00000179516 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm25255-201ENSMUST00000179579 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24755-201ENSMUST00000179691 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm26506-201ENSMUST00000179692 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm25086-201ENSMUST00000179931 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm23243-201ENSMUST00000180047 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24659-201ENSMUST00000180212 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm24169-201ENSMUST00000180244 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm23689-201ENSMUST00000180354 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm27359-201ENSMUST00000184153 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm27785-201ENSMUST00000184268 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm27466-201ENSMUST00000184396 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm27703-201ENSMUST00000184836 110 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm27321-201ENSMUST00000185021 205 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.05■□□□□ 0.32
Trdmt1O55055 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.05■□□□□ 0.32
Trdmt1O55055 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trdmt1O55055 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.05■□□□□ 0.32
Trdmt1O55055 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms