Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm25948-201ENSMUST00000175334 112 ntBASIC17.11■□□□□ 0.33
Prom1O54990 Mir6990-201ENSMUST00000183724 91 ntBASIC17.11■□□□□ 0.33
Prom1O54990 Gm44872-201ENSMUST00000207864 420 ntBASIC17.11■□□□□ 0.33
Prom1O54990 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.11■□□□□ 0.33
Prom1O54990 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.11■□□□□ 0.33
Prom1O54990 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Prom1O54990 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Prom1O54990 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Prom1O54990 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.1■□□□□ 0.33
Prom1O54990 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Gm12008-201ENSMUST00000117791 755 ntBASIC17.1■□□□□ 0.33
Prom1O54990 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Prom1O54990 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Prom1O54990 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.1■□□□□ 0.33
Prom1O54990 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.1■□□□□ 0.33
Prom1O54990 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Prom1O54990 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.09■□□□□ 0.33
Prom1O54990 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prom1O54990 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.09■□□□□ 0.33
Prom1O54990 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.09■□□□□ 0.33
Prom1O54990 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.09■□□□□ 0.33
Prom1O54990 Gm20949-201ENSMUST00000206478 952 ntBASIC17.09■□□□□ 0.33
Prom1O54990 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.09■□□□□ 0.33
Prom1O54990 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.09■□□□□ 0.33
Prom1O54990 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Prom1O54990 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Prom1O54990 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Prom1O54990 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Prom1O54990 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Prom1O54990 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Prom1O54990 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prom1O54990 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prom1O54990 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prom1O54990 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prom1O54990 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prom1O54990 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.08■□□□□ 0.33
Prom1O54990 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Prom1O54990 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.08■□□□□ 0.32
Prom1O54990 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Prom1O54990 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.08■□□□□ 0.32
Prom1O54990 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Prom1O54990 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.08■□□□□ 0.32
Prom1O54990 Gm43125-201ENSMUST00000201724 730 ntBASIC17.08■□□□□ 0.32
Prom1O54990 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Prom1O54990 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Prom1O54990 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Prom1O54990 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Prom1O54990 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Prom1O54990 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Prom1O54990 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Prom1O54990 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms