Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Rnf13O54965 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf13O54965 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.14□□□□□ -0.15
Rnf13O54965 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.14□□□□□ -0.15
Rnf13O54965 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.14□□□□□ -0.15
Rnf13O54965 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Rnf13O54965 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Rnf13O54965 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Rnf13O54965 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.13□□□□□ -0.15
Rnf13O54965 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Rnf13O54965 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.13□□□□□ -0.15
Rnf13O54965 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.13□□□□□ -0.15
Rnf13O54965 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.13□□□□□ -0.15
Rnf13O54965 Gm21559-201ENSMUST00000220638 855 ntBASIC14.13□□□□□ -0.15
Rnf13O54965 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.13□□□□□ -0.15
Rnf13O54965 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Gm8587-201ENSMUST00000076538 843 ntBASIC14.13□□□□□ -0.15
Rnf13O54965 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Rnf13O54965 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.13□□□□□ -0.15
Rnf13O54965 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Rnf13O54965 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf13O54965 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf13O54965 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf13O54965 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rnf13O54965 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Rnf13O54965 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.12□□□□□ -0.15
Rnf13O54965 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.12□□□□□ -0.15
Rnf13O54965 Gm6257-201ENSMUST00000163864 910 ntBASIC14.12□□□□□ -0.15
Rnf13O54965 Gm22697-201ENSMUST00000175194 63 ntBASIC14.12□□□□□ -0.15
Rnf13O54965 Mir6404-201ENSMUST00000183699 94 ntBASIC14.12□□□□□ -0.15
Rnf13O54965 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Rnf13O54965 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf13O54965 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf13O54965 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rnf13O54965 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Gm18101-201ENSMUST00000215769 548 ntBASIC14.11□□□□□ -0.15
Rnf13O54965 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf13O54965 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.11□□□□□ -0.15
Rnf13O54965 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms