Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ChkaO54804 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ChkaO54804 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.74■□□□□ 0.11
ChkaO54804 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
ChkaO54804 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
ChkaO54804 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Sybu-209ENSMUST00000228639 4113 ntBASIC15.74■□□□□ 0.11
ChkaO54804 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ChkaO54804 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
ChkaO54804 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ChkaO54804 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
ChkaO54804 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.73■□□□□ 0.11
ChkaO54804 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
ChkaO54804 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.73■□□□□ 0.11
ChkaO54804 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.73■□□□□ 0.11
ChkaO54804 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
ChkaO54804 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.73■□□□□ 0.11
ChkaO54804 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Gm27742-201ENSMUST00000184667 60 ntBASIC15.73■□□□□ 0.11
ChkaO54804 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
ChkaO54804 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC15.73■□□□□ 0.11
ChkaO54804 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ChkaO54804 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ChkaO54804 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.72■□□□□ 0.11
ChkaO54804 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.72■□□□□ 0.11
ChkaO54804 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.72■□□□□ 0.11
ChkaO54804 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.72■□□□□ 0.11
ChkaO54804 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.72■□□□□ 0.11
ChkaO54804 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ChkaO54804 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ChkaO54804 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.71■□□□□ 0.11
ChkaO54804 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.71■□□□□ 0.11
ChkaO54804 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms