Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Npc1O35604 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 App-207ENSMUST00000227737 2827 ntBASIC15.2■□□□□ 0.02
Npc1O35604 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Npc1O35604 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Npc1O35604 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Npc1O35604 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Npc1O35604 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Npc1O35604 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.19■□□□□ 0.02
Npc1O35604 Gm8344-201ENSMUST00000119813 856 ntBASIC15.19■□□□□ 0.02
Npc1O35604 Gm11780-201ENSMUST00000136880 516 ntBASIC15.19■□□□□ 0.02
Npc1O35604 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Npc1O35604 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Npc1O35604 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.19■□□□□ 0.02
Npc1O35604 Gm6089-201ENSMUST00000197666 938 ntBASIC15.19■□□□□ 0.02
Npc1O35604 Gm2651-201ENSMUST00000203560 838 ntBASIC15.19■□□□□ 0.02
Npc1O35604 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Npc1O35604 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Npc1O35604 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Npc1O35604 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Npc1O35604 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Npc1O35604 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Npc1O35604 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.18■□□□□ 0.02
Npc1O35604 Gm7222-201ENSMUST00000117512 906 ntBASIC15.18■□□□□ 0.02
Npc1O35604 Gm6443-201ENSMUST00000203599 874 ntBASIC15.18■□□□□ 0.02
Npc1O35604 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.18■□□□□ 0.02
Npc1O35604 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Npc1O35604 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Npc1O35604 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Npc1O35604 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Npc1O35604 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.17■□□□□ 0.02
Npc1O35604 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Npc1O35604 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Npc1O35604 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.17■□□□□ 0.02
Npc1O35604 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.16■□□□□ 0.02
Npc1O35604 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Npc1O35604 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Npc1O35604 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms