Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.51■□□□□ 0.39
Stx1aO35526 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Stx1aO35526 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Gm43799-201ENSMUST00000201845 579 ntBASIC17.5■□□□□ 0.39
Stx1aO35526 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.5■□□□□ 0.39
Stx1aO35526 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Stx1aO35526 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Stx1aO35526 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Stx1aO35526 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.5■□□□□ 0.39
Stx1aO35526 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.5■□□□□ 0.39
Stx1aO35526 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Stx1aO35526 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Stx1aO35526 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Stx1aO35526 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Stx1aO35526 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Stx1aO35526 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.49■□□□□ 0.39
Stx1aO35526 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.49■□□□□ 0.39
Stx1aO35526 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Gm22697-201ENSMUST00000175194 63 ntBASIC17.49■□□□□ 0.39
Stx1aO35526 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.49■□□□□ 0.39
Stx1aO35526 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.49■□□□□ 0.39
Stx1aO35526 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.49■□□□□ 0.39
Stx1aO35526 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.49■□□□□ 0.39
Stx1aO35526 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Stx1aO35526 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.49■□□□□ 0.39
Stx1aO35526 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Stx1aO35526 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Stx1aO35526 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.48■□□□□ 0.39
Stx1aO35526 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Stx1aO35526 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.48■□□□□ 0.39
Stx1aO35526 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.48■□□□□ 0.39
Stx1aO35526 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Stx1aO35526 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Stx1aO35526 Gm18101-201ENSMUST00000215769 548 ntBASIC17.48■□□□□ 0.39
Stx1aO35526 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Stx1aO35526 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Stx1aO35526 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Stx1aO35526 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stx1aO35526 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Stx1aO35526 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.47■□□□□ 0.39
Stx1aO35526 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Stx1aO35526 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Stx1aO35526 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.47■□□□□ 0.39
Stx1aO35526 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stx1aO35526 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Stx1aO35526 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms