Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn6O35454 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn6O35454 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn6O35454 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Clcn6O35454 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn6O35454 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn6O35454 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn6O35454 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.85■□□□□ 0.29
Clcn6O35454 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Clcn6O35454 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Clcn6O35454 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Clcn6O35454 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC16.84■□□□□ 0.29
Clcn6O35454 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Clcn6O35454 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Gm6113-201ENSMUST00000180319 639 ntBASIC16.84■□□□□ 0.29
Clcn6O35454 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Clcn6O35454 Gm28975-201ENSMUST00000186412 686 ntBASIC16.84■□□□□ 0.29
Clcn6O35454 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC16.84■□□□□ 0.29
Clcn6O35454 Gm10297-201ENSMUST00000207136 651 ntBASIC16.84■□□□□ 0.29
Clcn6O35454 Gm44681-201ENSMUST00000208447 842 ntBASIC16.84■□□□□ 0.29
Clcn6O35454 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Gm45114-201ENSMUST00000208280 1349 ntBASIC16.84■□□□□ 0.29
Clcn6O35454 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.84■□□□□ 0.29
Clcn6O35454 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn6O35454 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn6O35454 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn6O35454 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn6O35454 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn6O35454 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn6O35454 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.83■□□□□ 0.28
Clcn6O35454 Gm11539-201ENSMUST00000119837 557 ntBASIC16.83■□□□□ 0.28
Clcn6O35454 Gm13436-201ENSMUST00000120418 567 ntBASIC16.83■□□□□ 0.28
Clcn6O35454 Gm15061-201ENSMUST00000121076 1046 ntBASIC16.83■□□□□ 0.28
Clcn6O35454 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.83■□□□□ 0.28
Clcn6O35454 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clcn6O35454 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Clcn6O35454 C030010L15Rik-201ENSMUST00000181465 715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 AC132237.2-201ENSMUST00000221702 1209 ntBASIC16.83■□□□□ 0.28
Clcn6O35454 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clcn6O35454 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Clcn6O35454 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Clcn6O35454 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn6O35454 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Clcn6O35454 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcn6O35454 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcn6O35454 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Gm13559-201ENSMUST00000120476 863 ntBASIC16.82■□□□□ 0.28
Clcn6O35454 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.82■□□□□ 0.28
Clcn6O35454 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC16.82■□□□□ 0.28
Clcn6O35454 Gm27225-201ENSMUST00000183833 557 ntBASIC16.82■□□□□ 0.28
Clcn6O35454 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC16.82■□□□□ 0.28
Clcn6O35454 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Clcn6O35454 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn6O35454 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Clcn6O35454 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.82■□□□□ 0.28
Clcn6O35454 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms