Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Efnb3O35393 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Efnb3O35393 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Efnb3O35393 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Efnb3O35393 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Efnb3O35393 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.33□□□□□ -0.44
Efnb3O35393 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Gm45058-201ENSMUST00000205810 766 ntBASIC12.33□□□□□ -0.44
Efnb3O35393 Gm18959-201ENSMUST00000208954 655 ntBASIC12.33□□□□□ -0.44
Efnb3O35393 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.33□□□□□ -0.44
Efnb3O35393 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Efnb3O35393 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.33□□□□□ -0.44
Efnb3O35393 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Efnb3O35393 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Efnb3O35393 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Efnb3O35393 Gm7889-201ENSMUST00000185591 958 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Gm7213-201ENSMUST00000215977 950 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Gm10566-201ENSMUST00000086739 996 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.32□□□□□ -0.44
Efnb3O35393 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Efnb3O35393 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Efnb3O35393 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Efnb3O35393 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.31□□□□□ -0.44
Efnb3O35393 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Efnb3O35393 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.31□□□□□ -0.44
Efnb3O35393 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Efnb3O35393 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.31□□□□□ -0.44
Efnb3O35393 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.31□□□□□ -0.44
Efnb3O35393 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.31□□□□□ -0.44
Efnb3O35393 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Efnb3O35393 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Efnb3O35393 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms