Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col15a1O35206 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.81■□□□□ 0.76
Col15a1O35206 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
Col15a1O35206 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.81■□□□□ 0.76
Col15a1O35206 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC19.81■□□□□ 0.76
Col15a1O35206 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col15a1O35206 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Col15a1O35206 Mir6977-201ENSMUST00000184960 64 ntBASIC19.8■□□□□ 0.76
Col15a1O35206 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.8■□□□□ 0.76
Col15a1O35206 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col15a1O35206 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.79■□□□□ 0.76
Col15a1O35206 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col15a1O35206 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col15a1O35206 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col15a1O35206 Gm13015-201ENSMUST00000118674 204 ntBASIC19.79■□□□□ 0.76
Col15a1O35206 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC19.79■□□□□ 0.76
Col15a1O35206 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
Col15a1O35206 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.79■□□□□ 0.76
Col15a1O35206 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.79■□□□□ 0.76
Col15a1O35206 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Col15a1O35206 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Col15a1O35206 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col15a1O35206 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col15a1O35206 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Col15a1O35206 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Gm23547-201ENSMUST00000158210 271 ntBASIC19.78■□□□□ 0.76
Col15a1O35206 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.78■□□□□ 0.76
Col15a1O35206 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col15a1O35206 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Col15a1O35206 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col15a1O35206 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Col15a1O35206 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Gm8096-201ENSMUST00000209921 1591 ntBASIC19.77■□□□□ 0.76
Col15a1O35206 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col15a1O35206 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col15a1O35206 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC19.77■□□□□ 0.76
Col15a1O35206 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col15a1O35206 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.77■□□□□ 0.76
Col15a1O35206 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Col15a1O35206 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Col15a1O35206 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms