Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Pkd1O08852 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.71□□□□□ -0.85
Pkd1O08852 Ldb3-207ENSMUST00000227819 1499 ntBASIC9.71□□□□□ -0.85
Pkd1O08852 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Gm11543-201ENSMUST00000120758 370 ntBASIC9.71□□□□□ -0.85
Pkd1O08852 Gm27920-201ENSMUST00000183953 96 ntBASIC9.71□□□□□ -0.85
Pkd1O08852 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.71□□□□□ -0.85
Pkd1O08852 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Pkd1O08852 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.85
Pkd1O08852 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.85
Pkd1O08852 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
Pkd1O08852 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.71□□□□□ -0.85
Pkd1O08852 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC9.71□□□□□ -0.85
Pkd1O08852 AC160980.1-201ENSMUST00000224136 970 ntBASIC9.71□□□□□ -0.85
Pkd1O08852 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Pkd1O08852 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Pkd1O08852 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC9.71□□□□□ -0.86
Pkd1O08852 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.71□□□□□ -0.86
Pkd1O08852 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.71□□□□□ -0.86
Pkd1O08852 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Pkd1O08852 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Pkd1O08852 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 CT009510.1-201ENSMUST00000227972 270 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Pkd1O08852 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Pkd1O08852 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Pkd1O08852 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Pkd1O08852 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Pkd1O08852 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.7□□□□□ -0.86
Pkd1O08852 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.7□□□□□ -0.86
Pkd1O08852 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.7□□□□□ -0.86
Pkd1O08852 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Gm26596-201ENSMUST00000180464 2655 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
Pkd1O08852 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Pkd1O08852 Gm29310-201ENSMUST00000185468 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21825-201ENSMUST00000185728 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm29109-201ENSMUST00000185895 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21896-201ENSMUST00000186520 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21873-201ENSMUST00000186728 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21794-201ENSMUST00000187056 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21880-201ENSMUST00000187275 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21826-201ENSMUST00000187451 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21198-201ENSMUST00000188393 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21749-201ENSMUST00000189343 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21901-201ENSMUST00000189568 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm29424-201ENSMUST00000189716 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm28599-201ENSMUST00000189838 694 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21867-201ENSMUST00000189917 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm29269-201ENSMUST00000190087 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21722-201ENSMUST00000190153 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm28423-201ENSMUST00000190701 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21899-201ENSMUST00000190745 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21910-201ENSMUST00000191163 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21849-201ENSMUST00000191571 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm28678-201ENSMUST00000191593 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm20910-201ENSMUST00000193268 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Gm21871-201ENSMUST00000194621 696 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 AC162801.1-201ENSMUST00000220612 198 ntBASIC9.7□□□□□ -0.86
Pkd1O08852 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Pkd1O08852 Gm5320-201ENSMUST00000207163 1519 ntBASIC9.69□□□□□ -0.86
Pkd1O08852 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pkd1O08852 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pkd1O08852 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Pkd1O08852 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms