Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tcof1O08784 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tcof1O08784 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tcof1O08784 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tcof1O08784 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Tcof1O08784 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tcof1O08784 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.18■□□□□ 0.5
Tcof1O08784 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.18■□□□□ 0.5
Tcof1O08784 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Tcof1O08784 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.18■□□□□ 0.5
Tcof1O08784 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.18■□□□□ 0.5
Tcof1O08784 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Tcof1O08784 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tcof1O08784 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tcof1O08784 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Tcof1O08784 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Gm45167-201ENSMUST00000208007 322 ntBASIC18.17■□□□□ 0.5
Tcof1O08784 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.17■□□□□ 0.5
Tcof1O08784 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tcof1O08784 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.16■□□□□ 0.5
Tcof1O08784 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Tcof1O08784 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.16■□□□□ 0.5
Tcof1O08784 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
Tcof1O08784 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.16■□□□□ 0.5
Tcof1O08784 Gm5264-201ENSMUST00000190584 848 ntBASIC18.16■□□□□ 0.5
Tcof1O08784 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.16■□□□□ 0.5
Tcof1O08784 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.16■□□□□ 0.5
Tcof1O08784 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Tcof1O08784 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tcof1O08784 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tcof1O08784 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Tcof1O08784 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.15■□□□□ 0.5
Tcof1O08784 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.15■□□□□ 0.5
Tcof1O08784 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Tcof1O08784 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Gm4899-201ENSMUST00000178708 719 ntBASIC18.15■□□□□ 0.5
Tcof1O08784 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.15■□□□□ 0.5
Tcof1O08784 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.15■□□□□ 0.5
Tcof1O08784 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.15■□□□□ 0.5
Tcof1O08784 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tcof1O08784 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Tcof1O08784 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tcof1O08784 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms