Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casp6O08738 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casp6O08738 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Casp6O08738 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Casp6O08738 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Casp6O08738 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.31□□□□□ -0.28
Casp6O08738 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Casp6O08738 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.31□□□□□ -0.28
Casp6O08738 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
Casp6O08738 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.31□□□□□ -0.28
Casp6O08738 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.31□□□□□ -0.28
Casp6O08738 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Casp6O08738 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Casp6O08738 Rarb-207ENSMUST00000225921 2756 ntBASIC13.31□□□□□ -0.28
Casp6O08738 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Casp6O08738 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Casp6O08738 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.3□□□□□ -0.28
Casp6O08738 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.3□□□□□ -0.28
Casp6O08738 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.3□□□□□ -0.28
Casp6O08738 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.3□□□□□ -0.28
Casp6O08738 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Casp6O08738 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Casp6O08738 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.3□□□□□ -0.28
Casp6O08738 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.3□□□□□ -0.28
Casp6O08738 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Casp6O08738 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Casp6O08738 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Casp6O08738 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Casp6O08738 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.29□□□□□ -0.28
Casp6O08738 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.29□□□□□ -0.28
Casp6O08738 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.29□□□□□ -0.28
Casp6O08738 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Casp6O08738 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.29□□□□□ -0.28
Casp6O08738 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Casp6O08738 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.29□□□□□ -0.28
Casp6O08738 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Casp6O08738 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Casp6O08738 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Casp6O08738 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms