Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Gm9172-201ENSMUST00000212092 954 ntBASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tnfrsf11bO08712 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tnfrsf11bO08712 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tnfrsf11bO08712 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.8■□□□□ 0.12
Tnfrsf11bO08712 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Tnfrsf11bO08712 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms