Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim34bJ3QNR8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim34bJ3QNR8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Thap2-203ENSMUST00000218989 527 ntBASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trim34bJ3QNR8 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Gm15427-201ENSMUST00000117288 531 ntBASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim34bJ3QNR8 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim34bJ3QNR8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms