Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.27□□□□□ -0.29
Gm3727J3QM54 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Gm18666-201ENSMUST00000190039 958 ntBASIC13.26□□□□□ -0.29
Gm3727J3QM54 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.26□□□□□ -0.29
Gm3727J3QM54 Gm44450-201ENSMUST00000199528 114 ntBASIC13.26□□□□□ -0.29
Gm3727J3QM54 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Gm42569-201ENSMUST00000200539 472 ntBASIC13.26□□□□□ -0.29
Gm3727J3QM54 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Gm3727J3QM54 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Gm26571-201ENSMUST00000181399 666 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Gm18421-201ENSMUST00000204122 625 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Gm7791-201ENSMUST00000219066 539 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.25□□□□□ -0.29
Gm3727J3QM54 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Gm3727J3QM54 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Efs-202ENSMUST00000227037 2540 ntBASIC13.24□□□□□ -0.29
Gm3727J3QM54 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.24□□□□□ -0.29
Gm3727J3QM54 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Gm3727J3QM54 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms