Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Gm18246-201ENSMUST00000221023 728 ntBASIC16.5■□□□□ 0.23
Gm17535J3KMR8 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Dancr-204ENSMUST00000132389 2347 ntBASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm17535J3KMR8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Gm10499-201ENSMUST00000174094 934 ntBASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.49■□□□□ 0.23
Gm17535J3KMR8 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm17535J3KMR8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Prob1-201ENSMUST00000097619 3021 ntBASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.48■□□□□ 0.23
Gm17535J3KMR8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Mir3113-201ENSMUST00000175478 76 ntBASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Mir8117-201ENSMUST00000184773 107 ntBASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Gm37935-201ENSMUST00000192012 982 ntBASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Gm17968-201ENSMUST00000194902 784 ntBASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Gm17535J3KMR8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Gm17535J3KMR8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms