Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.62■□□□□ 0.57
Ube4aE9Q735 Mir6990-201ENSMUST00000183724 91 ntBASIC18.62■□□□□ 0.57
Ube4aE9Q735 Gm44872-201ENSMUST00000207864 420 ntBASIC18.62■□□□□ 0.57
Ube4aE9Q735 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube4aE9Q735 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4aE9Q735 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm18889-201ENSMUST00000174284 929 ntBASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4aE9Q735 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.6■□□□□ 0.57
Ube4aE9Q735 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4aE9Q735 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Ube4aE9Q735 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.59■□□□□ 0.57
Ube4aE9Q735 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.59■□□□□ 0.57
Ube4aE9Q735 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.59■□□□□ 0.57
Ube4aE9Q735 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 AC139382.1-201ENSMUST00000221402 498 ntBASIC18.59■□□□□ 0.57
Ube4aE9Q735 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.59■□□□□ 0.57
Ube4aE9Q735 Gm10154-201ENSMUST00000084445 354 ntBASIC18.59■□□□□ 0.57
Ube4aE9Q735 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4aE9Q735 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ube4aE9Q735 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms