Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Gm6089-201ENSMUST00000197666 938 ntBASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Cpsf4lE9Q2N0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gm13884-201ENSMUST00000118103 829 ntBASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gm7862-201ENSMUST00000121461 292 ntBASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gm28659-201ENSMUST00000188013 759 ntBASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.17□□□□□ -0.3
Cpsf4lE9Q2N0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cpsf4lE9Q2N0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Gm14722-201ENSMUST00000118943 689 ntBASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Gm27741-201ENSMUST00000185060 237 ntBASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Cpsf4lE9Q2N0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms