Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm7895-201ENSMUST00000187459 1173 ntBASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm11543-201ENSMUST00000120758 370 ntBASIC8.6□□□□□ -1.03
Herc1E9PZP8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 AC124457.1-201ENSMUST00000198845 120 ntBASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm4607-201ENSMUST00000206649 577 ntBASIC8.6□□□□□ -1.03
Herc1E9PZP8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Herc1E9PZP8 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 BC021767-201ENSMUST00000126387 1716 ntBASIC8.59□□□□□ -1.03
Herc1E9PZP8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Ighv8-7-201ENSMUST00000194349 297 ntBASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm42997-202ENSMUST00000200321 985 ntBASIC8.59□□□□□ -1.03
Herc1E9PZP8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 AC140293.1-201ENSMUST00000225626 1247 ntBASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm10702-201ENSMUST00000098929 1268 ntBASIC8.59□□□□□ -1.03
Herc1E9PZP8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Gm43808-201ENSMUST00000202534 2065 ntBASIC8.59□□□□□ -1.03
Herc1E9PZP8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Cts7-204ENSMUST00000225321 1257 ntBASIC8.59□□□□□ -1.03
Herc1E9PZP8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Herc1E9PZP8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC8.59□□□□□ -1.04
Herc1E9PZP8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.04
Herc1E9PZP8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC8.59□□□□□ -1.04
Herc1E9PZP8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm3222-201ENSMUST00000071282 990 ntBASIC8.58□□□□□ -1.04
Herc1E9PZP8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Gm43378-201ENSMUST00000199336 582 ntBASIC8.58□□□□□ -1.04
Herc1E9PZP8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Herc1E9PZP8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms