Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Gm19164-201ENSMUST00000210667 640 ntBASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm5878E9PUB3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm5878E9PUB3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm5878E9PUB3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Gm5878E9PUB3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms