Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.85■□□□□ 0.45
Syce3B5KM66 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.85■□□□□ 0.45
Syce3B5KM66 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.85■□□□□ 0.45
Syce3B5KM66 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.85■□□□□ 0.45
Syce3B5KM66 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Syce3B5KM66 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Syce3B5KM66 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.84■□□□□ 0.45
Syce3B5KM66 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.84■□□□□ 0.45
Syce3B5KM66 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.84■□□□□ 0.45
Syce3B5KM66 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Syce3B5KM66 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Syce3B5KM66 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.84■□□□□ 0.45
Syce3B5KM66 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Syce3B5KM66 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syce3B5KM66 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Syce3B5KM66 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syce3B5KM66 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Syce3B5KM66 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Syce3B5KM66 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Syce3B5KM66 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.83■□□□□ 0.44
Syce3B5KM66 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Syce3B5KM66 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Syce3B5KM66 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Syce3B5KM66 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Syce3B5KM66 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Syce3B5KM66 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.82■□□□□ 0.44
Syce3B5KM66 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.82■□□□□ 0.44
Syce3B5KM66 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Syce3B5KM66 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.82■□□□□ 0.44
Syce3B5KM66 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.82■□□□□ 0.44
Syce3B5KM66 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.82■□□□□ 0.44
Syce3B5KM66 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Syce3B5KM66 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Syce3B5KM66 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.81■□□□□ 0.44
Syce3B5KM66 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.81■□□□□ 0.44
Syce3B5KM66 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.81■□□□□ 0.44
Syce3B5KM66 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.81■□□□□ 0.44
Syce3B5KM66 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Syce3B5KM66 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Syce3B5KM66 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.81■□□□□ 0.44
Syce3B5KM66 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Syce3B5KM66 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms