Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Gm25144-201ENSMUST00000179561 110 ntBASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Gm25352-201ENSMUST00000179815 110 ntBASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Mir7684-201ENSMUST00000183858 60 ntBASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC19.87■□□□□ 0.77
Scn7aB1AYL1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn7aB1AYL1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Celf4-206ENSMUST00000224553 1729 ntBASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Scn7aB1AYL1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 AC125206.2-201ENSMUST00000217454 574 ntBASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Scn7aB1AYL1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn7aB1AYL1 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn7aB1AYL1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn7aB1AYL1 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Scn7aB1AYL1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Scn7aB1AYL1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Scn7aB1AYL1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Scn7aB1AYL1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.82■□□□□ 0.76
Scn7aB1AYL1 Gm7775-201ENSMUST00000218871 853 ntBASIC19.82■□□□□ 0.76
Scn7aB1AYL1 Gm2423-201ENSMUST00000074863 733 ntBASIC19.82■□□□□ 0.76
Scn7aB1AYL1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms