Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Gm12887B1AVM1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Gm11336-201ENSMUST00000118168 334 ntBASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Gm12887B1AVM1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Mir1199-201ENSMUST00000117015 119 ntBASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Gm12887B1AVM1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms