Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col6a4A2AX52 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.1□□□□□ -0.31
Col6a4A2AX52 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Gm13223-201ENSMUST00000118609 747 ntBASIC13.1□□□□□ -0.31
Col6a4A2AX52 Gm25948-201ENSMUST00000175334 112 ntBASIC13.1□□□□□ -0.31
Col6a4A2AX52 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col6a4A2AX52 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col6a4A2AX52 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.08□□□□□ -0.31
Col6a4A2AX52 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.08□□□□□ -0.31
Col6a4A2AX52 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Col6a4A2AX52 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.08□□□□□ -0.31
Col6a4A2AX52 Gm17837-201ENSMUST00000186435 985 ntBASIC13.08□□□□□ -0.31
Col6a4A2AX52 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a4A2AX52 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.08□□□□□ -0.31
Col6a4A2AX52 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Col6a4A2AX52 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Col6a4A2AX52 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Col6a4A2AX52 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Col6a4A2AX52 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms