Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm45133-201ENSMUST00000207548 2773 ntBASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav9d-4A0A0G2JG37 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm13186-201ENSMUST00000118031 316 ntBASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav9d-4A0A0G2JG37 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm10698-201ENSMUST00000182663 604 ntBASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm8520-201ENSMUST00000186517 868 ntBASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Timm23-208ENSMUST00000226683 750 ntBASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 AC154649.1-201ENSMUST00000227392 384 ntBASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9d-4A0A0G2JG37 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 BC037039-201ENSMUST00000192003 2205 ntBASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9d-4A0A0G2JG37 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms