Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trbv19A0A0B4J1H4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Rprl3-201ENSMUST00000157400 290 ntBASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trbv19A0A0B4J1H4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trbv19A0A0B4J1H4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trbv19A0A0B4J1H4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms