Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm11336-201ENSMUST00000118168 334 ntBASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm6257-201ENSMUST00000163864 910 ntBASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trbv3A0A0A6YYE2 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Trbv3A0A0A6YYE2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trbv3A0A0A6YYE2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv3A0A0A6YYE2 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trbv3A0A0A6YYE2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trbv3A0A0A6YYE2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trbv3A0A0A6YYE2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm20049-201ENSMUST00000219950 730 ntBASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Timm23-208ENSMUST00000226683 750 ntBASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trbv3A0A0A6YYE2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trbv3A0A0A6YYE2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Gm38058-201ENSMUST00000194323 4368 ntBASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12□□□□□ -0.49
Trbv3A0A0A6YYE2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms