Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trbc1A0A0A6YWV4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trbc1A0A0A6YWV4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm13884-201ENSMUST00000118103 829 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm6257-201ENSMUST00000163864 910 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44357-201ENSMUST00000195897 142 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm19658-201ENSMUST00000196231 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44367-201ENSMUST00000196836 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44350-201ENSMUST00000197197 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44390-201ENSMUST00000197533 144 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44313-201ENSMUST00000198018 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44486-201ENSMUST00000198508 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44314-201ENSMUST00000199263 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44394-201ENSMUST00000199558 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44484-201ENSMUST00000199873 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44466-201ENSMUST00000200264 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm44359-201ENSMUST00000200671 138 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm5864-201ENSMUST00000202263 970 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trbc1A0A0A6YWV4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm8097-201ENSMUST00000117903 829 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm8825-201ENSMUST00000182565 998 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm4518-201ENSMUST00000182638 718 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.28□□□□□ -0.12
Trbc1A0A0A6YWV4 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms