Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gm6858-201ENSMUST00000208582 1468 ntBASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav13-4-dv7A0A075B6C2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms