Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav6-5A0A075B6B5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav6-5A0A075B6B5 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav6-5A0A075B6B5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Trav6-5A0A075B6B5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms