Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav6d-7A0A075B6B0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm29707-201ENSMUST00000196325 491 ntBASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-7A0A075B6B0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm27357-201ENSMUST00000183754 135 ntBASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm28033-201ENSMUST00000184224 96 ntBASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-7A0A075B6B0 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-7A0A075B6B0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms