Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.39□□□□□ -0.43
Trav17A0A075B655 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav17A0A075B655 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Gm44430-201ENSMUST00000203376 995 ntBASIC12.38□□□□□ -0.43
Trav17A0A075B655 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav17A0A075B655 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.38□□□□□ -0.43
Trav17A0A075B655 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.37□□□□□ -0.43
Trav17A0A075B655 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Gm10812-201ENSMUST00000099864 546 ntBASIC12.37□□□□□ -0.43
Trav17A0A075B655 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav17A0A075B655 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.36□□□□□ -0.43
Trav17A0A075B655 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav17A0A075B655 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms