Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav3-4A0A075B654 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 App-207ENSMUST00000227737 2827 ntBASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Gm44549-201ENSMUST00000208351 577 ntBASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav3-4A0A075B654 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav3-4A0A075B654 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms