Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav5-4A0A075B652 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Gm23634-201ENSMUST00000175071 91 ntBASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Gm17808-201ENSMUST00000200859 894 ntBASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav5-4A0A075B652 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Gm45328-201ENSMUST00000210942 917 ntBASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.04□□□□□ -0.32
Trav5-4A0A075B652 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 AA414768-201ENSMUST00000121924 1257 ntBASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Gm6728-201ENSMUST00000178117 1065 ntBASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Gm29518-201ENSMUST00000190858 372 ntBASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav5-4A0A075B652 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav5-4A0A075B652 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms