Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4-4-dv10A0A075B651 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm7889-201ENSMUST00000185591 958 ntBASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm29257-201ENSMUST00000186115 639 ntBASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4-4-dv10A0A075B651 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm15039-201ENSMUST00000118914 875 ntBASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.13□□□□□ -0.47
Trav4-4-dv10A0A075B651 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Gm5049-201ENSMUST00000195878 1590 ntBASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav4-4-dv10A0A075B651 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms