Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Efs-202ENSMUST00000227037 2540 ntBASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Mir1199-201ENSMUST00000117015 119 ntBASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav4-2A0A075B638 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Gm7370-201ENSMUST00000219471 767 ntBASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav4-2A0A075B638 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav4-2A0A075B638 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Gm13474-201ENSMUST00000122466 815 ntBASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Gm9889-202ENSMUST00000206983 1577 ntBASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav4-2A0A075B638 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4-2A0A075B638 Gm7367-201ENSMUST00000057611 492 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms