Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav6-1A0A075B5Z8 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav6-1A0A075B5Z8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Gm7889-201ENSMUST00000185591 958 ntBASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6-1A0A075B5Z8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav6-1A0A075B5Z8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms