Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.36□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav5-1A0A075B5Z7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Gm45167-201ENSMUST00000208007 322 ntBASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav5-1A0A075B5Z7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav5-1A0A075B5Z7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav5-1A0A075B5Z7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.33□□□□□ -0.27
Trav5-1A0A075B5Z7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav5-1A0A075B5Z7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav5-1A0A075B5Z7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav5-1A0A075B5Z7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms