Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Gm8097-201ENSMUST00000117903 829 ntBASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv4A0A075B5I2 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trbv4A0A075B5I2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trbv4A0A075B5I2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv4A0A075B5I2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv4A0A075B5I2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trbv4A0A075B5I2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv4A0A075B5I2 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.58■□□□□ 0.09
Trbv4A0A075B5I2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv4A0A075B5I2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trbv4A0A075B5I2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trbv4A0A075B5I2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms