Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Gm25911-201ENSMUST00000157621 56 ntBASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.91■□□□□ 0.3
Nr1h3Q9Z0Y9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Gm17271-201ENSMUST00000165535 355 ntBASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Gm19164-201ENSMUST00000210667 640 ntBASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1h3Q9Z0Y9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
Nr1h3Q9Z0Y9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.89■□□□□ 0.3
Nr1h3Q9Z0Y9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nr1h3Q9Z0Y9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm6257-201ENSMUST00000163864 910 ntBASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1h3Q9Z0Y9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm11434-201ENSMUST00000122379 629 ntBASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nr1h3Q9Z0Y9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms