Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clcf1Q9QZM3 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clcf1Q9QZM3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Gm4459-201ENSMUST00000118750 468 ntBASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Gm18733-201ENSMUST00000173950 856 ntBASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clcf1Q9QZM3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Clcf1Q9QZM3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Gm4535-201ENSMUST00000182274 558 ntBASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Gm10355-201ENSMUST00000097146 517 ntBASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clcf1Q9QZM3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms