Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Gm9794-201ENSMUST00000202370 423 ntBASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Crlf1Q9JM58 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Gm6415-201ENSMUST00000118488 348 ntBASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Gm16198-201ENSMUST00000118766 670 ntBASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Crlf1Q9JM58 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Gm2272-201ENSMUST00000194903 582 ntBASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Crlf1Q9JM58 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crlf1Q9JM58 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crlf1Q9JM58 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crlf1Q9JM58 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.46□□□□□ -0.42
Crlf1Q9JM58 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crlf1Q9JM58 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Crlf1Q9JM58 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Gm12490-201ENSMUST00000120255 560 ntBASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.45□□□□□ -0.42
Crlf1Q9JM58 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms