Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl28Q9JIL2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl28Q9JIL2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Gm5587-201ENSMUST00000206270 674 ntBASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccl28Q9JIL2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccl28Q9JIL2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms