Protein–RNA interactions for Protein: Q9ESX4

Zcchc17, Nucleolar protein of 40 kDa, mousemouse

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc17Q9ESX4 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Zcchc17Q9ESX4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zcchc17Q9ESX4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Zcchc17Q9ESX4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 AC124732.2-201ENSMUST00000221977 316 ntBASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.33■□□□□ 0.52
Zcchc17Q9ESX4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Gm25948-201ENSMUST00000175334 112 ntBASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Zcchc17Q9ESX4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Zcchc17Q9ESX4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Zcchc17Q9ESX4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Zcchc17Q9ESX4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms