Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ush1cQ9ES64 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ush1cQ9ES64 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Gm38027-201ENSMUST00000192315 235 ntBASIC17.9■□□□□ 0.46
Ush1cQ9ES64 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Gm5417-201ENSMUST00000079706 384 ntBASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ush1cQ9ES64 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ush1cQ9ES64 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ush1cQ9ES64 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Ush1cQ9ES64 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
Ush1cQ9ES64 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ush1cQ9ES64 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.88■□□□□ 0.45
Ush1cQ9ES64 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms