Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.5■□□□□ 0.55
Ube3bQ9ES34 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.5■□□□□ 0.55
Ube3bQ9ES34 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Ube3bQ9ES34 AC119177.1-201ENSMUST00000227647 1332 ntBASIC18.49■□□□□ 0.55
Ube3bQ9ES34 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.48■□□□□ 0.55
Ube3bQ9ES34 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Gm13597-201ENSMUST00000121239 375 ntBASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Gm44945-201ENSMUST00000206764 1187 ntBASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ube3bQ9ES34 App-207ENSMUST00000227737 2827 ntBASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Mir8117-201ENSMUST00000184773 107 ntBASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ube3bQ9ES34 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.45■□□□□ 0.54
Ube3bQ9ES34 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms