Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4bQ9ES00 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ube4bQ9ES00 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.02■□□□□ -0
Ube4bQ9ES00 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ube4bQ9ES00 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.02■□□□□ -0
Ube4bQ9ES00 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.02■□□□□ -0
Ube4bQ9ES00 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube4bQ9ES00 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube4bQ9ES00 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube4bQ9ES00 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Gm17661-201ENSMUST00000170317 270 ntBASIC15□□□□□ -0.01
Ube4bQ9ES00 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15□□□□□ -0.01
Ube4bQ9ES00 AC154649.1-201ENSMUST00000227392 384 ntBASIC15□□□□□ -0.01
Ube4bQ9ES00 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Gm7712-202ENSMUST00000222331 1510 ntBASIC15□□□□□ -0.01
Ube4bQ9ES00 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15□□□□□ -0.01
Ube4bQ9ES00 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ube4bQ9ES00 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ube4bQ9ES00 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms